BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D03LP1|AL427889
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1787 1626 0.0
>3x_Contig1787
Length = 34189
Score = 1626 bits (815), Expect = 0.0
Identities = 826/835 (98%)
Strand = Plus / Minus
Query: 1 gatcaatgataatttatcattgttttctctaagcgattggatattgtttaatgcctttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30759 gatcaatgataatttatcattgttttctctaagcgattggatattgtttaatgcctttgt 30700
Query: 61 atgaaataaattattggcgttctttatttcttgttctctattgttgcgatactgctggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30699 atgaaataaattattggcgttctttatttcttgttctctattgttgcgatactgctggta 30640
Query: 121 ctccgcctccatgttcaccaattcatcctgaaggctagagtttcttgatttcacttctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30639 ctccgcctccatgttcaccaattcatcctgaaggctagagtttcttgatttcacttctaa 30580
Query: 181 tagctcatttttcaagctggataaggaaccttccatttccttattcctggcatatttcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30579 tagctcatttttcaagctggataaggaaccttccatttccttattcctggcatatttcga 30520
Query: 241 ctcaagaacttcaattttgaggattaagtcctggatgatttgatctttttcagatatcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30519 ctcaagaacttcaattttgaggattaagtcctggatgatttgatctttttcagatatcgt 30460
Query: 301 ctgttggagaacttcaacctgagcttgggawtgtatcacattcttttcaactgaagtgtt 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 30459 ctgttggagaacttcaacctgagcttgggattgtatcacattcttttcaactgaagtgtt 30400
Query: 361 tctttccttgttttccaacatgtcgacaggaatttgtttaawttcctctaaacacactga 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 30399 tctttccttgttttccaacatgtcgacaggaatttgtttaatttcctctaaacacactga 30340
Query: 421 caactcatttggtttttcctgtagggataggactgacgttgcaaagtgaacataaatcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30339 caactcatttggtttttcctgtagggataggactgacgttgcaaagtgaacataaatcga 30280
Query: 481 gaataaatwcacatcagactttaaggttccattaaattcataaagctcttccaatttcgt 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30279 gaataaattcacatcagactttaaggttccattaaattcataaagctcttccaatttcgt 30220
Query: 541 ggtgacgaaggtgttaatcgtatggaaagtgttatacaggcttcttattcgctgctgatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30219 ggtgacgaaggtgttaatcgtatggaaagtgttatacaggcttcttattcgctgctgatc 30160
Query: 601 agattcctttgacaagtgttcagtatcgkacaaaaktctttccacckackcttcaagaaa 660
|||||||||||||||||||||||||||| |||||| |||||||||| || ||||||||||
Sbjct: 30159 agattcctttgacaagtgttcagtatcggacaaaagtctttccaccgacgcttcaagaaa 30100
Query: 661 catttgaatagccgtaaatagaaccctaggatccgataaagtgaagtctgcattttctaa 720
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 30099 catttgaatagccgtaaatagaaccctaggatccgataaagtgatgtctgcattttctaa 30040
Query: 721 tagagataattkaaccttgattggatgactattttttactgattccaataataagtccaa 780
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30039 tagagataattgaaccttgattggatgactattttttactgattccaataataagtccaa 29980
Query: 781 attgatcttttctttcaaatatgtcacaccagcatcatatttaatcatcgcataa 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29979 attgatcttttctttcaaatatgtcacaccagcatcatatttaatcatcgcataa 29925
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7269
Number of Sequences: 1807
Number of extensions: 7269
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)